01/22/2020: The Murakami Lab, in collaboration with the Hedglin Lab, publishes an article in Nucleic Acids Research (NAR) on reiterative transcription

Reiterative transcription is a non-canonical form of RNA synthesis by RNA polymerase in which a ribonucleotide specified by a single base in the DNA template is repetitively added to the nascent RNA transcript. The Murakami lab previously determined the X-ray crystal structure of the bacterial RNA polymerase engaged in reiterative transcription from the pyrG promoter, which contains eight poly-G RNA bases synthesized using three C bases in the DNA as a template and extends RNA without displacement of the promoter recognition σ factor from the core enzyme. In this study, the Murakami lab determined a series of transcript initiation complex structures from the pyrG promoter using soak–trigger–freeze X-ray crystallography. The Murakami lab also performed in vitro transcription assays to determine the length of poly-G RNA from the pyrG promoter variants. The Hedglin lab performed biochemical assays to monitor template DNA translocation during RNA synthesis from the pyrG promoter.  Our study revealed how RNA slips on template DNA and how RNA polymerase and template DNA determine length of reiterative RNA product. Lastly, the Murakami lab determined a structure of a transcript initiation complex at the pyrBI promoter and proposed an alternative mechanism of RNA slippage and extension requiring the σ dissociation from the core enzyme.

To view the article on this exciting advance, click HERE

 

Leave a Reply

Your email address will not be published. Required fields are marked *